WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZC404.3b Sequence Name  ZC404.3b
Length (nt)  255   Chromosome Location  V: 6785491-6785595
Chromosome . Primary Identifier  V Chromosome Location . Start  6785491
Chromosome Location . End  6785595
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC404.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29620 SPE-39, isoform b 10.0 84 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00058887
WBRNAi00021675

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZC404.3b 6785491 6785595 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004975 spe-39 ZC404.3 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZC404.3b 6785491 6785595 1
CDS:ZC404.3b 6785768 6785917 1

1 Sequence

Length
255

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZC404.3b.2 ZC404.3b.2 1553   V: 6785451-6787481
Transcript:ZC404.3b.1 ZC404.3b.1 1880   V: 6785457-6787864