WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19F4.1a.1 Sequence Name  T19F4.1a.1
Length (nt)  1457   Chromosome Location  V: 6870304-6873691
Chromosome . Primary Identifier  V Chromosome Location . Start  6870304
Chromosome Location . End  6873691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19F4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020586 frpr-18 T19F4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19F4.1a T19F4.1a 1230   V: 6870310-6870423

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19F4.1a.1 6870304 6873691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185228   120   V: 6870304-6870423 Caenorhabditis elegans
Exon185230   398   V: 6870536-6870933 Caenorhabditis elegans
Exon185233   142   V: 6870982-6871123 Caenorhabditis elegans
Exon185236   126   V: 6871780-6871905 Caenorhabditis elegans
Exon185238   131   V: 6872021-6872151 Caenorhabditis elegans
Exon185241   129   V: 6872209-6872337 Caenorhabditis elegans
Exon185245   31   V: 6872393-6872423 Caenorhabditis elegans
Exon185246   87   V: 6872626-6872712 Caenorhabditis elegans
Exon185249   72   V: 6872955-6873026 Caenorhabditis elegans
Exon185252   221   V: 6873471-6873691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19F4.1a.1 6870304 6873691 1

1 Sequence

Length
1457

1 Sequence Ontology Term

Identifier Name Description
transcript