WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.4.1 Sequence Name  K11C4.4.1
Length (nt)  1580   Chromosome Location  V: 6898540-6900223
Chromosome . Primary Identifier  V Chromosome Location . Start  6898540
Chromosome Location . End  6900223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003844 odc-1 K11C4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.4 K11C4.4 1269   V: 6898584-6899096

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11C4.4.1 6898540 6900223 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185327   557   V: 6898540-6899096 Caenorhabditis elegans
Exon185328   301   V: 6899144-6899444 Caenorhabditis elegans
Exon185329   722   V: 6899502-6900223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11C4.4.1 6898540 6900223 -1

1 Sequence

Length
1580

1 Sequence Ontology Term

Identifier Name Description
transcript