WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5a.1 Sequence Name  K11C4.5a.1
Length (nt)  16030   Chromosome Location  V: 6901681-6929038
Chromosome . Primary Identifier  V Chromosome Location . Start  6901681
Chromosome Location . End  6929038 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5a K11C4.5a 15606   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5a.1 6901681 6929038 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185332   489   V: 6901681-6902169 Caenorhabditis elegans
Exon185348   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185364   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185380   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185396   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185412   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185428   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185444   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185460   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185476   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185492   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185508   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185524   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185540   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185556   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185572   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185588   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185596   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185612   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185628   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185644   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185660   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185676   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185692   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185708   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185724   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185740   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185756   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185772   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185780   151   V: 6914225-6914375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5a.1 6901681 6929038 -1

1 Sequence

Length
16030

1 Sequence Ontology Term

Identifier Name Description
transcript