WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5d.1 Sequence Name  K11C4.5d.1
Length (nt)  15550   Chromosome Location  V: 6901682-6928949
Chromosome . Primary Identifier  V Chromosome Location . Start  6901682
Chromosome Location . End  6928949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5d K11C4.5d 15216   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5d.1 6901682 6928949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185333   488   V: 6901682-6902169 Caenorhabditis elegans
Exon185351   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185367   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185383   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185399   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185415   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185431   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185447   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185463   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185479   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185495   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185511   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185527   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185543   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185559   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185575   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185599   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185615   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185631   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185647   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185663   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185679   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185695   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185711   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185727   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185743   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185759   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185791   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185807   1117   V: 6914628-6915744 Caenorhabditis elegans
Exon185823   894   V: 6915792-6916685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5d.1 6901682 6928949 -1

1 Sequence

Length
15550

1 Sequence Ontology Term

Identifier Name Description
transcript