WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5e.1 Sequence Name  K11C4.5e.1
Length (nt)  15936   Chromosome Location  V: 6901689-6928949
Chromosome . Primary Identifier  V Chromosome Location . Start  6901689
Chromosome Location . End  6928949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5e K11C4.5e 15609   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5e.1 6901689 6928949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185357   481   V: 6901689-6902169 Caenorhabditis elegans
Exon185373   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185389   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185405   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185421   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185437   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185453   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185469   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185485   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185501   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185517   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185533   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185553   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185565   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185581   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185597   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185611   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185621   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185637   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185653   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185669   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185685   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185701   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185717   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185733   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185749   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185765   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185781   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185795   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185803   151   V: 6914225-6914375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5e.1 6901689 6928949 -1

1 Sequence

Length
15936

1 Sequence Ontology Term

Identifier Name Description
transcript