WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5a.1 Sequence Name  K11C4.5a.1
Length (nt)  16030   Chromosome Location  V: 6901681-6929038
Chromosome . Primary Identifier  V Chromosome Location . Start  6901681
Chromosome Location . End  6929038 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5a K11C4.5a 15606   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5a.1 6901681 6929038 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185387   489   V: 6901681-6902169 Caenorhabditis elegans
Exon185403   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185419   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185435   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185451   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185467   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185483   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185499   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185515   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185531   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185547   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185563   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185579   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185595   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185611   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185627   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185643   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185651   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185667   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185683   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185699   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185715   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185731   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185747   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185763   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185779   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185795   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185811   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185827   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185835   151   V: 6914225-6914375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5a.1 6901681 6929038 -1

1 Sequence

Length
16030

1 Sequence Ontology Term

Identifier Name Description
transcript