WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5c.1 Sequence Name  K11C4.5c.1
Length (nt)  15896   Chromosome Location  V: 6901684-6928949
Chromosome . Primary Identifier  V Chromosome Location . Start  6901684
Chromosome Location . End  6928949 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5c K11C4.5c 15564   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5c.1 6901684 6928949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185389   486   V: 6901684-6902169 Caenorhabditis elegans
Exon185405   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185421   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185437   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185453   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185469   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185485   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185501   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185517   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185533   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185549   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185565   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185581   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185597   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185613   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185629   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185653   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185669   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185685   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185701   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185717   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185733   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185749   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185765   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185781   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185797   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185813   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185828   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185836   151   V: 6914225-6914375 Caenorhabditis elegans
Exon185845   124   V: 6914458-6914581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5c.1 6901684 6928949 -1

1 Sequence

Length
15896

1 Sequence Ontology Term

Identifier Name Description
transcript