WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5g.1 Sequence Name  K11C4.5g.1
Length (nt)  15895   Chromosome Location  V: 6901688-6928949
Chromosome . Primary Identifier  V Chromosome Location . Start  6901688
Chromosome Location . End  6928949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5g K11C4.5g 15567   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5g.1 6901688 6928949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185390   482   V: 6901688-6902169 Caenorhabditis elegans
Exon185409   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185425   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185441   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185457   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185473   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185489   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185505   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185521   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185537   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185553   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185569   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185589   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185601   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185617   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185633   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185657   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185673   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185689   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185705   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185721   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185737   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185753   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185769   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185785   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185801   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185817   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185830   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185838   151   V: 6914225-6914375 Caenorhabditis elegans
Exon185849   124   V: 6914458-6914581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5g.1 6901688 6928949 -1

1 Sequence

Length
15895

1 Sequence Ontology Term

Identifier Name Description
transcript