WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5i.1 Sequence Name  K11C4.5i.1
Length (nt)  15600   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5i K11C4.5i 15600   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5i.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185337   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185356   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185372   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185388   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185404   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185420   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185436   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185452   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185468   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185484   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185500   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185516   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185528   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185548   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185564   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185580   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185592   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185604   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185620   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185636   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185652   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185668   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185684   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185700   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185716   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185732   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185748   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185764   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185776   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185784   151   V: 6914225-6914375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5i.1 6902016 6924961 -1

1 Sequence

Length
15600

1 Sequence Ontology Term

Identifier Name Description
transcript