WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5j.1 Sequence Name  K11C4.5j.1
Length (nt)  15252   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5j K11C4.5j 15252   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5j.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185338   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185357   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185373   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185389   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185405   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185421   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185437   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185453   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185469   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185485   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185501   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185517   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185529   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185549   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185565   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185581   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185593   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185605   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185621   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185637   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185653   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185669   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185685   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185701   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185717   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185733   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185749   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185765   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185797   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185813   1117   V: 6914628-6915744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5j.1 6902016 6924961 -1

1 Sequence

Length
15252

1 Sequence Ontology Term

Identifier Name Description
transcript