WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5j.1 Sequence Name  K11C4.5j.1
Length (nt)  15252   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5j K11C4.5j 15252   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5j.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185359   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185378   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185394   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185410   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185426   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185442   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185458   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185474   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185490   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185506   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185522   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185538   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185550   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185570   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185586   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185602   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185614   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185626   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185642   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185658   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185674   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185690   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185706   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185722   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185738   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185754   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185770   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185786   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185818   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185834   1117   V: 6914628-6915744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5j.1 6902016 6924961 -1

1 Sequence

Length
15252

1 Sequence Ontology Term

Identifier Name Description
transcript