WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5l.1 Sequence Name  K11C4.5l.1
Length (nt)  15210   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5l K11C4.5l 15210   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11C4.5l.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185361   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185380   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185396   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185412   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185428   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185444   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185460   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185476   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185492   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185508   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185524   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185540   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185552   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185572   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185588   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185604   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185628   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185644   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185660   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185676   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185692   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185708   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185724   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185740   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185756   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185772   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185788   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185820   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185836   1117   V: 6914628-6915744 Caenorhabditis elegans
Exon185852   894   V: 6915792-6916685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11C4.5l.1 6902016 6924961 -1

1 Sequence

Length
15210

1 Sequence Ontology Term

Identifier Name Description
transcript