WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5j.1 Sequence Name  K11C4.5j.1
Length (nt)  15252   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5j K11C4.5j 15252   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5j.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185393   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185412   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185428   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185444   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185460   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185476   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185492   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185508   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185524   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185540   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185556   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185572   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185584   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185604   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185620   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185636   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185648   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185660   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185676   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185692   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185708   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185724   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185740   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185756   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185772   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185788   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185804   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185820   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185852   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185868   1117   V: 6914628-6915744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5j.1 6902016 6924961 -1

1 Sequence

Length
15252

1 Sequence Ontology Term

Identifier Name Description
transcript