WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5m.1 Sequence Name  K11C4.5m.1
Length (nt)  15603   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5m K11C4.5m 15603   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5m.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185362   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185381   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185397   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185413   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185429   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185445   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185461   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185477   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185493   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185509   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185525   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185541   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185557   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185573   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185589   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185605   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185615   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185629   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185645   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185661   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185677   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185693   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185709   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185725   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185741   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185757   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185773   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185789   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185799   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185807   151   V: 6914225-6914375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5m.1 6902016 6924961 -1

1 Sequence

Length
15603

1 Sequence Ontology Term

Identifier Name Description
transcript