WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5k.1 Sequence Name  K11C4.5k.1
Length (nt)  15558   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5k K11C4.5k 15558   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5k.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185394   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185413   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185429   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185445   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185461   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185477   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185493   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185509   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185525   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185541   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185557   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185573   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185585   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185605   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185621   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185637   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185661   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185677   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185693   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185709   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185725   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185741   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185757   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185773   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185789   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185805   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185821   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185832   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185840   151   V: 6914225-6914375 Caenorhabditis elegans
Exon185853   124   V: 6914458-6914581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5k.1 6902016 6924961 -1

1 Sequence

Length
15558

1 Sequence Ontology Term

Identifier Name Description
transcript