WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5o.1 Sequence Name  K11C4.5o.1
Length (nt)  15561   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5o.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5o K11C4.5o 15561   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5o.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185343   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185362   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185378   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185394   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185410   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185426   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185442   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185458   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185474   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185490   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185506   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185522   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185538   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185554   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185570   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185586   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185610   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185626   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185642   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185658   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185674   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185690   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185706   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185722   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185738   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185754   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185770   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185779   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185787   151   V: 6914225-6914375 Caenorhabditis elegans
Exon185802   124   V: 6914458-6914581 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5o.1 6902016 6924961 -1

1 Sequence

Length
15561

1 Sequence Ontology Term

Identifier Name Description
transcript