WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5m.1 Sequence Name  K11C4.5m.1
Length (nt)  15603   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5m K11C4.5m 15603   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5m.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185396   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185415   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185431   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185447   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185463   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185479   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185495   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185511   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185527   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185543   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185559   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185575   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185591   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185607   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185623   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185639   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185649   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185663   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185679   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185695   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185711   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185727   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185743   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185759   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185775   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185791   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185807   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185823   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185833   197   V: 6913973-6914169 Caenorhabditis elegans
Exon185841   151   V: 6914225-6914375 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5m.1 6902016 6924961 -1

1 Sequence

Length
15603

1 Sequence Ontology Term

Identifier Name Description
transcript