WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5p.1 Sequence Name  K11C4.5p.1
Length (nt)  15213   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5p K11C4.5p 15213   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5p.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185344   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185363   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185379   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185395   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185411   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185427   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185443   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185459   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185475   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185491   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185507   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185523   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185539   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185555   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185571   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185587   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185611   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185627   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185643   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185659   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185675   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185691   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185707   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185723   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185739   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185755   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185771   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185803   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185819   1117   V: 6914628-6915744 Caenorhabditis elegans
Exon185835   894   V: 6915792-6916685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5p.1 6902016 6924961 -1

1 Sequence

Length
15213

1 Sequence Ontology Term

Identifier Name Description
transcript