WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5n.1 Sequence Name  K11C4.5n.1
Length (nt)  15255   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5n K11C4.5n 15255   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5n.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185397   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185416   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185432   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185448   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185464   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185480   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185496   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185512   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185528   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185544   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185560   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185576   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185592   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185608   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185624   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185640   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185650   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185664   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185680   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185696   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185712   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185728   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185744   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185760   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185776   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185792   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185808   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185824   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185856   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185872   1117   V: 6914628-6915744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5n.1 6902016 6924961 -1

1 Sequence

Length
15255

1 Sequence Ontology Term

Identifier Name Description
transcript