WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5b.1 Sequence Name  K11C4.5b.1
Length (nt)  15258   Chromosome Location  V: 6902016-6928949
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6928949 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5b K11C4.5b 15258   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5b.1 6902016 6928949 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185345   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185349   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185365   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185381   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185397   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185413   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185429   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185445   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185461   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185477   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185493   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185509   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185525   110   V: 6907336-6907445 Caenorhabditis elegans
Exon185541   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185557   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185573   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185589   42   V: 6908834-6908875 Caenorhabditis elegans
Exon185597   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185613   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185629   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185645   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185661   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185677   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185693   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185709   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185725   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185741   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185757   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185789   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185805   1117   V: 6914628-6915744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5b.1 6902016 6928949 -1

1 Sequence

Length
15258

1 Sequence Ontology Term

Identifier Name Description
transcript