WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11C4.5p.1 Sequence Name  K11C4.5p.1
Length (nt)  15213   Chromosome Location  V: 6902016-6924961
Chromosome . Primary Identifier  V Chromosome Location . Start  6902016
Chromosome Location . End  6924961 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11C4.5p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006801 unc-68 K11C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11C4.5p K11C4.5p 15213   V: 6902016-6902169

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5p.1 6902016 6924961 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon185399   154   V: 6902016-6902169 Caenorhabditis elegans
Exon185418   166   V: 6902218-6902383 Caenorhabditis elegans
Exon185434   957   V: 6902552-6903508 Caenorhabditis elegans
Exon185450   112   V: 6903558-6903669 Caenorhabditis elegans
Exon185466   355   V: 6903725-6904079 Caenorhabditis elegans
Exon185482   297   V: 6904130-6904426 Caenorhabditis elegans
Exon185498   923   V: 6904480-6905402 Caenorhabditis elegans
Exon185514   218   V: 6905452-6905669 Caenorhabditis elegans
Exon185530   121   V: 6905719-6905839 Caenorhabditis elegans
Exon185546   114   V: 6906343-6906456 Caenorhabditis elegans
Exon185562   462   V: 6906513-6906974 Caenorhabditis elegans
Exon185578   94   V: 6907024-6907117 Caenorhabditis elegans
Exon185594   113   V: 6907608-6907720 Caenorhabditis elegans
Exon185610   95   V: 6908162-6908256 Caenorhabditis elegans
Exon185626   155   V: 6908304-6908458 Caenorhabditis elegans
Exon185642   86   V: 6908513-6908598 Caenorhabditis elegans
Exon185666   288   V: 6908956-6909243 Caenorhabditis elegans
Exon185682   161   V: 6909299-6909459 Caenorhabditis elegans
Exon185698   458   V: 6909505-6909962 Caenorhabditis elegans
Exon185714   109   V: 6910005-6910113 Caenorhabditis elegans
Exon185730   142   V: 6910161-6910302 Caenorhabditis elegans
Exon185746   100   V: 6911781-6911880 Caenorhabditis elegans
Exon185762   111   V: 6911927-6912037 Caenorhabditis elegans
Exon185778   327   V: 6912082-6912408 Caenorhabditis elegans
Exon185794   395   V: 6912460-6912854 Caenorhabditis elegans
Exon185810   777   V: 6912901-6913677 Caenorhabditis elegans
Exon185826   155   V: 6913725-6913879 Caenorhabditis elegans
Exon185858   124   V: 6914458-6914581 Caenorhabditis elegans
Exon185874   1117   V: 6914628-6915744 Caenorhabditis elegans
Exon185890   894   V: 6915792-6916685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11C4.5p.1 6902016 6924961 -1

1 Sequence

Length
15213

1 Sequence Ontology Term

Identifier Name Description
transcript