WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57E12B.3.1 Sequence Name  Y57E12B.3.1
Length (nt)  1929   Chromosome Location  V: 6931475-6934312
Chromosome . Primary Identifier  V Chromosome Location . Start  6931475
Chromosome Location . End  6934312 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57E12B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021963 lipl-6 Y57E12B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57E12B.3 Y57E12B.3 1776   V: 6931622-6931701

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57E12B.3.1 6931475 6934312 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186101   227   V: 6931475-6931701 Caenorhabditis elegans
Exon186102   140   V: 6932028-6932167 Caenorhabditis elegans
Exon186103   143   V: 6932215-6932357 Caenorhabditis elegans
Exon186104   141   V: 6932404-6932544 Caenorhabditis elegans
Exon186105   156   V: 6932592-6932747 Caenorhabditis elegans
Exon186106   146   V: 6932823-6932968 Caenorhabditis elegans
Exon186107   213   V: 6933013-6933225 Caenorhabditis elegans
Exon186108   111   V: 6933436-6933546 Caenorhabditis elegans
Exon186109   100   V: 6933594-6933693 Caenorhabditis elegans
Exon186110   552   V: 6933761-6934312 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57E12B.3.1 6931475 6934312 -1

1 Sequence

Length
1929

1 Sequence Ontology Term

Identifier Name Description
transcript