WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4a.1 Sequence Name  T07H8.4a.1
Length (nt)  6150   Chromosome Location  V: 6956537-6966425
Chromosome . Primary Identifier  V Chromosome Location . Start  6956537
Chromosome Location . End  6966425 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4a T07H8.4a 6024   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4a.1 6956537 6966425 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186136   53   V: 6956537-6956589 Caenorhabditis elegans
Exon186139   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186148   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186161   250   V: 6957173-6957422 Caenorhabditis elegans
Exon186166   124   V: 6957478-6957601 Caenorhabditis elegans
Exon186176   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186186   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186195   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186204   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186214   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186223   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186233   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186243   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186253   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186263   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186272   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186280   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186288   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186296   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186304   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186312   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186320   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186328   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186336   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186344   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186352   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186360   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186367   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186374   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186381   124   V: 6965890-6966013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4a.1 6956537 6966425 1

1 Sequence

Length
6150

1 Sequence Ontology Term

Identifier Name Description
transcript