WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4d.2 Sequence Name  T07H8.4d.2
Length (nt)  5989   Chromosome Location  V: 6956637-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6956637
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4d T07H8.4d 5988   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4d.2 6956637 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186138   142   V: 6956637-6956778 Caenorhabditis elegans
Exon186152   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186159   226   V: 6957173-6957398 Caenorhabditis elegans
Exon186172   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186180   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186190   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186199   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186208   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186218   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186227   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186237   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186247   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186257   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186266   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186275   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186283   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186291   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186299   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186307   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186315   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186323   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186331   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186339   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186347   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186354   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186362   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186369   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186376   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186383   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186388   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4d.2 6956637 6966352 1

1 Sequence

Length
5989

1 Sequence Ontology Term

Identifier Name Description
transcript