WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4d.1 Sequence Name  T07H8.4d.1
Length (nt)  6090   Chromosome Location  V: 6956537-6966401
Chromosome . Primary Identifier  V Chromosome Location . Start  6956537
Chromosome Location . End  6966401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4d T07H8.4d 5988   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4d.1 6956537 6966401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186158   53   V: 6956537-6956589 Caenorhabditis elegans
Exon186161   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186172   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186179   226   V: 6957173-6957398 Caenorhabditis elegans
Exon186192   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186200   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186210   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186219   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186228   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186238   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186247   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186257   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186267   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186277   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186286   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186295   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186303   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186311   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186319   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186327   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186335   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186343   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186351   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186359   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186367   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186374   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186382   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186389   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186396   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186403   124   V: 6965890-6966013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4d.1 6956537 6966401 1

1 Sequence

Length
6090

1 Sequence Ontology Term

Identifier Name Description
transcript