WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4i.1 Sequence Name  T07H8.4i.1
Length (nt)  2865   Chromosome Location  V: 6956638-6960653
Chromosome . Primary Identifier  V Chromosome Location . Start  6956638
Chromosome Location . End  6960653 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4i T07H8.4i 2865   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4i.1 6956638 6960653 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186142   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186154   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186165   250   V: 6957173-6957422 Caenorhabditis elegans
Exon186174   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186184   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186194   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186203   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186212   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186222   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186232   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186242   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186252   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186261   549   V: 6960105-6960653 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4i.1 6956638 6960653 1

1 Sequence

Length
2865

1 Sequence Ontology Term

Identifier Name Description
transcript