WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4c.1 Sequence Name  T07H8.4c.1
Length (nt)  3504   Chromosome Location  V: 6956638-6961338
Chromosome . Primary Identifier  V Chromosome Location . Start  6956638
Chromosome Location . End  6961338 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4c T07H8.4c 3504   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4c.1 6956638 6961338 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186143   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186150   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186163   250   V: 6957173-6957422 Caenorhabditis elegans
Exon186170   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186178   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186188   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186197   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186206   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186216   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186225   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186235   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186245   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186255   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186271   789   V: 6960550-6961338 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4c.1 6956638 6961338 1

1 Sequence

Length
3504

1 Sequence Ontology Term

Identifier Name Description
transcript