WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4b.1 Sequence Name  T07H8.4b.1
Length (nt)  5280   Chromosome Location  V: 6956638-6965058
Chromosome . Primary Identifier  V Chromosome Location . Start  6956638
Chromosome Location . End  6965058 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4b T07H8.4b 5058   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4b.1 6956638 6965058 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186144   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186149   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186162   250   V: 6957173-6957422 Caenorhabditis elegans
Exon186169   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186177   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186187   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186196   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186205   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186215   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186224   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186234   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186244   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186254   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186264   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186273   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186281   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186289   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186297   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186305   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186313   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186321   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186329   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186337   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186345   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186359   413   V: 6964646-6965058 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4b.1 6956638 6965058 1

1 Sequence

Length
5280

1 Sequence Ontology Term

Identifier Name Description
transcript