WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4h.1 Sequence Name  T07H8.4h.1
Length (nt)  6021   Chromosome Location  V: 6956638-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6956638
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4h T07H8.4h 6021   V: 6956638-6956778

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4h.1 6956638 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186145   141   V: 6956638-6956778 Caenorhabditis elegans
Exon186153   89   V: 6957029-6957117 Caenorhabditis elegans
Exon186164   250   V: 6957173-6957422 Caenorhabditis elegans
Exon186168   124   V: 6957478-6957601 Caenorhabditis elegans
Exon186183   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186193   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186202   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186211   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186221   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186231   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186241   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186251   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186262   396   V: 6960108-6960503 Caenorhabditis elegans
Exon186270   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186279   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186287   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186295   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186303   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186311   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186319   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186327   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186335   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186343   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186351   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186358   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186366   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186373   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186380   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186387   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186392   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4h.1 6956638 6966352 1

1 Sequence

Length
6021

1 Sequence Ontology Term

Identifier Name Description
transcript