WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4f.1 Sequence Name  T07H8.4f.1
Length (nt)  5945   Chromosome Location  V: 6956736-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6956736
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4f T07H8.4f 5457   V: 6957565-6957601

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4f.1 6956736 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186146   43   V: 6956736-6956778 Caenorhabditis elegans
Exon186156   370   V: 6957029-6957398 Caenorhabditis elegans
Exon186173   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186182   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186192   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186201   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186210   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186220   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186229   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186239   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186249   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186259   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186268   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186277   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186285   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186293   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186301   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186309   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186317   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186325   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186333   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186341   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186349   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186356   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186364   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186371   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186378   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186385   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186390   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4f.1 6956736 6966352 1

1 Sequence

Length
5945

1 Sequence Ontology Term

Identifier Name Description
transcript