WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4f.1 Sequence Name  T07H8.4f.1
Length (nt)  5945   Chromosome Location  V: 6956736-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6956736
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4f T07H8.4f 5457   V: 6957565-6957601

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4f.1 6956736 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186167   43   V: 6956736-6956778 Caenorhabditis elegans
Exon186177   370   V: 6957029-6957398 Caenorhabditis elegans
Exon186194   112   V: 6957490-6957601 Caenorhabditis elegans
Exon186203   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186213   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186222   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186231   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186241   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186250   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186260   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186270   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186280   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186289   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186298   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186306   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186314   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186322   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186330   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186338   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186346   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186354   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186362   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186370   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186377   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186385   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186392   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186399   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186406   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186411   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4f.1 6956736 6966352 1

1 Sequence

Length
5945

1 Sequence Ontology Term

Identifier Name Description
transcript