WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4e.1 Sequence Name  T07H8.4e.1
Length (nt)  5865   Chromosome Location  V: 6957078-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6957078
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4e T07H8.4e 5865   V: 6957078-6957398

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4e.1 6957078 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186157   321   V: 6957078-6957398 Caenorhabditis elegans
Exon186167   124   V: 6957478-6957601 Caenorhabditis elegans
Exon186181   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186191   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186200   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186209   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186219   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186228   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186238   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186248   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186258   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186267   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186276   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186284   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186292   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186300   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186308   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186316   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186324   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186332   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186340   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186348   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186355   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186363   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186370   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186377   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186384   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186389   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4e.1 6957078 6966352 1

1 Sequence

Length
5865

1 Sequence Ontology Term

Identifier Name Description
transcript