WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4e.1 Sequence Name  T07H8.4e.1
Length (nt)  5865   Chromosome Location  V: 6957078-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6957078
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4e T07H8.4e 5865   V: 6957078-6957398

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4e.1 6957078 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186178   321   V: 6957078-6957398 Caenorhabditis elegans
Exon186188   124   V: 6957478-6957601 Caenorhabditis elegans
Exon186202   196   V: 6957769-6957964 Caenorhabditis elegans
Exon186212   91   V: 6958249-6958339 Caenorhabditis elegans
Exon186221   121   V: 6958388-6958508 Caenorhabditis elegans
Exon186230   213   V: 6958557-6958769 Caenorhabditis elegans
Exon186240   704   V: 6958814-6959517 Caenorhabditis elegans
Exon186249   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186259   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186269   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186279   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186288   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186297   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186305   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186313   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186321   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186329   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186337   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186345   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186353   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186361   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186369   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186376   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186384   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186391   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186398   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186405   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186410   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T07H8.4e.1 6957078 6966352 1

1 Sequence

Length
5865

1 Sequence Ontology Term

Identifier Name Description
transcript