WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.4g.1 Sequence Name  T07H8.4g.1
Length (nt)  4815   Chromosome Location  V: 6958798-6966352
Chromosome . Primary Identifier  V Chromosome Location . Start  6958798
Chromosome Location . End  6966352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.4g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.4g T07H8.4g 4815   V: 6958798-6959517

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4g.1 6958798 6966352 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186213   720   V: 6958798-6959517 Caenorhabditis elegans
Exon186230   124   V: 6959572-6959695 Caenorhabditis elegans
Exon186240   132   V: 6959741-6959872 Caenorhabditis elegans
Exon186250   143   V: 6959917-6960059 Caenorhabditis elegans
Exon186260   399   V: 6960105-6960503 Caenorhabditis elegans
Exon186269   735   V: 6960550-6961284 Caenorhabditis elegans
Exon186278   55   V: 6961365-6961419 Caenorhabditis elegans
Exon186286   107   V: 6961473-6961579 Caenorhabditis elegans
Exon186294   130   V: 6961658-6961787 Caenorhabditis elegans
Exon186302   70   V: 6961832-6961901 Caenorhabditis elegans
Exon186310   137   V: 6961970-6962106 Caenorhabditis elegans
Exon186318   201   V: 6962156-6962356 Caenorhabditis elegans
Exon186326   204   V: 6962406-6962609 Caenorhabditis elegans
Exon186334   80   V: 6962683-6962762 Caenorhabditis elegans
Exon186342   191   V: 6962818-6963008 Caenorhabditis elegans
Exon186350   242   V: 6963056-6963297 Caenorhabditis elegans
Exon186357   138   V: 6964646-6964783 Caenorhabditis elegans
Exon186365   195   V: 6965152-6965346 Caenorhabditis elegans
Exon186372   331   V: 6965392-6965722 Caenorhabditis elegans
Exon186379   68   V: 6965775-6965842 Caenorhabditis elegans
Exon186386   124   V: 6965890-6966013 Caenorhabditis elegans
Exon186391   289   V: 6966064-6966352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.4g.1 6958798 6966352 1

1 Sequence

Length
4815

1 Sequence Ontology Term

Identifier Name Description
transcript