WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07H8.6.1 Sequence Name  T07H8.6.1
Length (nt)  2606   Chromosome Location  V: 6966396-6970000
Chromosome . Primary Identifier  V Chromosome Location . Start  6966396
Chromosome Location . End  6970000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07H8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004229 ptr-15 T07H8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07H8.6 T07H8.6 2523   V: 6966465-6966776

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.6.1 6966396 6970000 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186395   381   V: 6966396-6966776 Caenorhabditis elegans
Exon186396   137   V: 6966843-6966979 Caenorhabditis elegans
Exon186397   223   V: 6967218-6967440 Caenorhabditis elegans
Exon186398   94   V: 6967483-6967576 Caenorhabditis elegans
Exon186399   128   V: 6967623-6967750 Caenorhabditis elegans
Exon186400   204   V: 6967797-6968000 Caenorhabditis elegans
Exon186401   583   V: 6968052-6968634 Caenorhabditis elegans
Exon186402   191   V: 6968698-6968888 Caenorhabditis elegans
Exon186403   165   V: 6968932-6969096 Caenorhabditis elegans
Exon186404   96   V: 6969141-6969236 Caenorhabditis elegans
Exon186405   133   V: 6969292-6969424 Caenorhabditis elegans
Exon186406   92   V: 6969684-6969775 Caenorhabditis elegans
Exon186407   179   V: 6969822-6970000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07H8.6.1 6966396 6970000 -1

1 Sequence

Length
2606

1 Sequence Ontology Term

Identifier Name Description
transcript