WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33G8.7.2 Sequence Name  C33G8.7.2
Length (nt)  1138   Chromosome Location  V: 6980591-6982913
Chromosome . Primary Identifier  V Chromosome Location . Start  6980591
Chromosome Location . End  6982913 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33G8.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016364 nhr-161 C33G8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33G8.7 C33G8.7 1014   V: 6980647-6980748

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33G8.7.2 6980591 6982913 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186430   158   V: 6980591-6980748 Caenorhabditis elegans
Exon186432   660   V: 6980938-6981597 Caenorhabditis elegans
Exon186434   56   V: 6981653-6981708 Caenorhabditis elegans
Exon186436   134   V: 6981914-6982047 Caenorhabditis elegans
Exon186439   78   V: 6982092-6982169 Caenorhabditis elegans
Exon186440   52   V: 6982862-6982913 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33G8.7.2 6980591 6982913 -1

1 Sequence

Length
1138

1 Sequence Ontology Term

Identifier Name Description
transcript