WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20A1.7c.1 Sequence Name  F20A1.7c.1
Length (nt)  5649   Chromosome Location  V: 7028258-7036442
Chromosome . Primary Identifier  V Chromosome Location . Start  7028258
Chromosome Location . End  7036442 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20A1.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006666 twk-11 F20A1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20A1.7c F20A1.7c 4128   V: 7029827-7030078

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F20A1.7c.1 7028258 7036442 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186539   252   V: 7028258-7028509 Caenorhabditis elegans
Exon186544   1521   V: 7028558-7030078 Caenorhabditis elegans
Exon186550   156   V: 7030128-7030283 Caenorhabditis elegans
Exon186553   72   V: 7030561-7030632 Caenorhabditis elegans
Exon186556   317   V: 7030676-7030992 Caenorhabditis elegans
Exon186559   422   V: 7031048-7031469 Caenorhabditis elegans
Exon186562   1155   V: 7031531-7032685 Caenorhabditis elegans
Exon186565   320   V: 7032733-7033052 Caenorhabditis elegans
Exon186568   612   V: 7033239-7033850 Caenorhabditis elegans
Exon186571   125   V: 7033906-7034030 Caenorhabditis elegans
Exon186574   168   V: 7034081-7034248 Caenorhabditis elegans
Exon186577   164   V: 7034298-7034461 Caenorhabditis elegans
Exon186580   74   V: 7034584-7034657 Caenorhabditis elegans
Exon186583   118   V: 7034707-7034824 Caenorhabditis elegans
Exon186586   90   V: 7034876-7034965 Caenorhabditis elegans
Exon186589   65   V: 7035016-7035080 Caenorhabditis elegans
Exon186592   18   V: 7036425-7036442 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F20A1.7c.1 7028258 7036442 -1

1 Sequence

Length
5649

1 Sequence Ontology Term

Identifier Name Description
transcript