WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20A1.7b.1 Sequence Name  F20A1.7b.1
Length (nt)  5372   Chromosome Location  V: 7028332-7036575
Chromosome . Primary Identifier  V Chromosome Location . Start  7028332
Chromosome Location . End  7036575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20A1.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006666 twk-11 F20A1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20A1.7b F20A1.7b 5163   V: 7028408-7028509

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F20A1.7b.1 7028332 7036575 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186541   178   V: 7028332-7028509 Caenorhabditis elegans
Exon186543   369   V: 7028558-7028926 Caenorhabditis elegans
Exon186545   684   V: 7029184-7029867 Caenorhabditis elegans
Exon186547   132   V: 7029947-7030078 Caenorhabditis elegans
Exon186549   156   V: 7030128-7030283 Caenorhabditis elegans
Exon186552   72   V: 7030561-7030632 Caenorhabditis elegans
Exon186555   317   V: 7030676-7030992 Caenorhabditis elegans
Exon186558   422   V: 7031048-7031469 Caenorhabditis elegans
Exon186561   1155   V: 7031531-7032685 Caenorhabditis elegans
Exon186564   320   V: 7032733-7033052 Caenorhabditis elegans
Exon186567   612   V: 7033239-7033850 Caenorhabditis elegans
Exon186570   125   V: 7033906-7034030 Caenorhabditis elegans
Exon186573   168   V: 7034081-7034248 Caenorhabditis elegans
Exon186576   164   V: 7034298-7034461 Caenorhabditis elegans
Exon186579   74   V: 7034584-7034657 Caenorhabditis elegans
Exon186582   118   V: 7034707-7034824 Caenorhabditis elegans
Exon186585   90   V: 7034876-7034965 Caenorhabditis elegans
Exon186588   65   V: 7035016-7035080 Caenorhabditis elegans
Exon186594   151   V: 7036425-7036575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F20A1.7b.1 7028332 7036575 -1

1 Sequence

Length
5372

1 Sequence Ontology Term

Identifier Name Description
transcript