WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20A1.7c.1 Sequence Name  F20A1.7c.1
Length (nt)  5649   Chromosome Location  V: 7028258-7036442
Chromosome . Primary Identifier  V Chromosome Location . Start  7028258
Chromosome Location . End  7036442 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20A1.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006666 twk-11 F20A1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20A1.7c F20A1.7c 4128   V: 7029827-7030078

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F20A1.7c.1 7028258 7036442 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186594   252   V: 7028258-7028509 Caenorhabditis elegans
Exon186599   1521   V: 7028558-7030078 Caenorhabditis elegans
Exon186605   156   V: 7030128-7030283 Caenorhabditis elegans
Exon186608   72   V: 7030561-7030632 Caenorhabditis elegans
Exon186611   317   V: 7030676-7030992 Caenorhabditis elegans
Exon186614   422   V: 7031048-7031469 Caenorhabditis elegans
Exon186617   1155   V: 7031531-7032685 Caenorhabditis elegans
Exon186620   320   V: 7032733-7033052 Caenorhabditis elegans
Exon186623   612   V: 7033239-7033850 Caenorhabditis elegans
Exon186626   125   V: 7033906-7034030 Caenorhabditis elegans
Exon186629   168   V: 7034081-7034248 Caenorhabditis elegans
Exon186632   164   V: 7034298-7034461 Caenorhabditis elegans
Exon186635   74   V: 7034584-7034657 Caenorhabditis elegans
Exon186638   118   V: 7034707-7034824 Caenorhabditis elegans
Exon186641   90   V: 7034876-7034965 Caenorhabditis elegans
Exon186644   65   V: 7035016-7035080 Caenorhabditis elegans
Exon186647   18   V: 7036425-7036442 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F20A1.7c.1 7028258 7036442 -1

1 Sequence

Length
5649

1 Sequence Ontology Term

Identifier Name Description
transcript