WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20A1.9.1 Sequence Name  F20A1.9.1
Length (nt)  1359   Chromosome Location  V: 7049434-7051248
Chromosome . Primary Identifier  V Chromosome Location . Start  7049434
Chromosome Location . End  7051248 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20A1.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017620 tofu-2 F20A1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20A1.9 F20A1.9 1302   V: 7049470-7049602

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20A1.9.1 7049434 7051248 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186606   169   V: 7049434-7049602 Caenorhabditis elegans
Exon186607   125   V: 7049653-7049777 Caenorhabditis elegans
Exon186608   198   V: 7049824-7050021 Caenorhabditis elegans
Exon186609   97   V: 7050070-7050166 Caenorhabditis elegans
Exon186610   68   V: 7050209-7050276 Caenorhabditis elegans
Exon186611   449   V: 7050323-7050771 Caenorhabditis elegans
Exon186612   229   V: 7050828-7051056 Caenorhabditis elegans
Exon186613   24   V: 7051225-7051248 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20A1.9.1 7049434 7051248 -1

1 Sequence

Length
1359

1 Sequence Ontology Term

Identifier Name Description
transcript