WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C4.3.1 Sequence Name  T01C4.3.1
Length (nt)  765   Chromosome Location  V: 7117452-7118896
Chromosome . Primary Identifier  V Chromosome Location . Start  7117452
Chromosome Location . End  7118896 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005924 srx-33 T01C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C4.3 T01C4.3 765   V: 7117452-7117457

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01C4.3.1 7117452 7118896 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186811   6   V: 7117452-7117457 Caenorhabditis elegans
Exon186812   99   V: 7117516-7117614 Caenorhabditis elegans
Exon186813   236   V: 7117661-7117896 Caenorhabditis elegans
Exon186814   77   V: 7117948-7118024 Caenorhabditis elegans
Exon186815   147   V: 7118078-7118224 Caenorhabditis elegans
Exon186816   200   V: 7118697-7118896 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01C4.3.1 7117452 7118896 -1

1 Sequence

Length
765

1 Sequence Ontology Term

Identifier Name Description
transcript