WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01C4.1 Sequence Name  T01C4.1
Length (nt)  4557   Chromosome Location  V: 7123658-7123842
Chromosome . Primary Identifier  V Chromosome Location . Start  7123658
Chromosome Location . End  7123842
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C4.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51458 LMD-5 170.2 1518 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052102
WBRNAi00017952
WBRNAi00017957
WBRNAi00103499

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01C4.1 7123658 7123842 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020141 lmd-5 T01C4.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01C4.1 7123658 7123842 1
CDS:T01C4.1 7123892 7124343 1
CDS:T01C4.1 7124385 7124506 1
CDS:T01C4.1 7124550 7125068 1
CDS:T01C4.1 7125114 7125380 1
CDS:T01C4.1 7125426 7125628 1
CDS:T01C4.1 7125836 7125970 1
CDS:T01C4.1 7126018 7126444 1
CDS:T01C4.1 7126490 7126810 1
CDS:T01C4.1 7126855 7127492 1
CDS:T01C4.1 7127556 7128720 1
CDS:T01C4.1 7128768 7128890 1

1 Sequence

Length
4557

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01C4.1.1 T01C4.1.1 4628   V: 7123658-7128961