WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D2.5.1 Sequence Name  F10D2.5.1
Length (nt)  1730   Chromosome Location  V: 7139475-7141964
Chromosome . Primary Identifier  V Chromosome Location . Start  7139475
Chromosome Location . End  7141964 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017331 ugt-40 F10D2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D2.5 F10D2.5 1581   V: 7139602-7139776

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D2.5.1 7139475 7141964 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186872   302   V: 7139475-7139776 Caenorhabditis elegans
Exon186873   96   V: 7139892-7139987 Caenorhabditis elegans
Exon186875   137   V: 7140083-7140219 Caenorhabditis elegans
Exon186876   86   V: 7140265-7140350 Caenorhabditis elegans
Exon186877   140   V: 7140521-7140660 Caenorhabditis elegans
Exon186878   236   V: 7140706-7140941 Caenorhabditis elegans
Exon186879   143   V: 7141008-7141150 Caenorhabditis elegans
Exon186880   111   V: 7141197-7141307 Caenorhabditis elegans
Exon186881   223   V: 7141441-7141663 Caenorhabditis elegans
Exon186883   256   V: 7141709-7141964 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D2.5.1 7139475 7141964 -1

1 Sequence

Length
1730

1 Sequence Ontology Term

Identifier Name Description
transcript