WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D2.8b.1 Sequence Name  F10D2.8b.1
Length (nt)  1485   Chromosome Location  V: 7148688-7150686
Chromosome . Primary Identifier  V Chromosome Location . Start  7148688
Chromosome Location . End  7150686 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D2.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017334 F10D2.8 F10D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D2.8b F10D2.8b 1485   V: 7148688-7148862

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D2.8b.1 7148688 7150686 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186901   175   V: 7148688-7148862 Caenorhabditis elegans
Exon186902   233   V: 7148906-7149138 Caenorhabditis elegans
Exon186903   86   V: 7149186-7149271 Caenorhabditis elegans
Exon186904   624   V: 7149471-7150094 Caenorhabditis elegans
Exon186906   223   V: 7150273-7150495 Caenorhabditis elegans
Exon186907   144   V: 7150543-7150686 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D2.8b.1 7148688 7150686 -1

1 Sequence

Length
1485

1 Sequence Ontology Term

Identifier Name Description
transcript