WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10D2.2a.1 Sequence Name  F10D2.2a.1
Length (nt)  1818   Chromosome Location  V: 7157142-7159196
Chromosome . Primary Identifier  V Chromosome Location . Start  7157142
Chromosome Location . End  7159196 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10D2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017329 ugt-39 F10D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10D2.2a F10D2.2a 1572   V: 7157312-7157455

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10D2.2a.1 7157142 7159196 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186920   314   V: 7157142-7157455 Caenorhabditis elegans
Exon186922   310   V: 7157502-7157811 Caenorhabditis elegans
Exon186924   624   V: 7157853-7158476 Caenorhabditis elegans
Exon186925   86   V: 7158540-7158625 Caenorhabditis elegans
Exon186927   233   V: 7158669-7158901 Caenorhabditis elegans
Exon186929   251   V: 7158946-7159196 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10D2.2a.1 7157142 7159196 1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
transcript