WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09G2.3.1 Sequence Name  F09G2.3.1
Length (nt)  1947   Chromosome Location  V: 7184849-7188483
Chromosome . Primary Identifier  V Chromosome Location . Start  7184849
Chromosome Location . End  7188483 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09G2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017312 pitr-5 F09G2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09G2.3 F09G2.3 1530   V: 7185135-7185203

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.3.1 7184849 7188483 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186981   112   V: 7184849-7184960 Caenorhabditis elegans
Exon186983   189   V: 7185015-7185203 Caenorhabditis elegans
Exon186984   507   V: 7185259-7185765 Caenorhabditis elegans
Exon186986   217   V: 7186032-7186248 Caenorhabditis elegans
Exon186988   162   V: 7186297-7186458 Caenorhabditis elegans
Exon186990   136   V: 7186532-7186667 Caenorhabditis elegans
Exon186992   139   V: 7187371-7187509 Caenorhabditis elegans
Exon186994   485   V: 7187999-7188483 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.3.1 7184849 7188483 1

1 Sequence

Length
1947

1 Sequence Ontology Term

Identifier Name Description
transcript