WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09G2.8a.1 Sequence Name  F09G2.8a.1
Length (nt)  1653   Chromosome Location  V: 7188436-7193662
Chromosome . Primary Identifier  V Chromosome Location . Start  7188436
Chromosome Location . End  7193662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09G2.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017316 F09G2.8 F09G2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09G2.8a F09G2.8a 1551   V: 7188534-7188670

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.8a.1 7188436 7193662 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon186996   235   V: 7188436-7188670 Caenorhabditis elegans
Exon186998   421   V: 7189176-7189596 Caenorhabditis elegans
Exon187000   520   V: 7189646-7190165 Caenorhabditis elegans
Exon187002   246   V: 7190374-7190619 Caenorhabditis elegans
Exon187004   152   V: 7191657-7191808 Caenorhabditis elegans
Exon187007   79   V: 7193584-7193662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.8a.1 7188436 7193662 -1

1 Sequence

Length
1653

1 Sequence Ontology Term

Identifier Name Description
transcript