WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09G2.1c.1 Sequence Name  F09G2.1c.1
Length (nt)  3191   Chromosome Location  V: 7200232-7205635
Chromosome . Primary Identifier  V Chromosome Location . Start  7200232
Chromosome Location . End  7205635 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09G2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017310 F09G2.1 F09G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09G2.1c F09G2.1c 2688   V: 7200894-7200944

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.1c.1 7200232 7205635 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187019   109   V: 7200232-7200340 Caenorhabditis elegans
Exon187022   317   V: 7200628-7200944 Caenorhabditis elegans
Exon187028   150   V: 7201017-7201166 Caenorhabditis elegans
Exon187031   258   V: 7201453-7201710 Caenorhabditis elegans
Exon187034   376   V: 7202500-7202875 Caenorhabditis elegans
Exon187037   218   V: 7202948-7203165 Caenorhabditis elegans
Exon187040   269   V: 7203213-7203481 Caenorhabditis elegans
Exon187043   376   V: 7203614-7203989 Caenorhabditis elegans
Exon187046   763   V: 7204325-7205087 Caenorhabditis elegans
Exon187049   355   V: 7205281-7205635 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.1c.1 7200232 7205635 1

1 Sequence

Length
3191

1 Sequence Ontology Term

Identifier Name Description
transcript