WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09G2.1b.1 Sequence Name  F09G2.1b.1
Length (nt)  2859   Chromosome Location  V: 7200672-7205507
Chromosome . Primary Identifier  V Chromosome Location . Start  7200672
Chromosome Location . End  7205507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09G2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017310 F09G2.1 F09G2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09G2.1b F09G2.1b 2859   V: 7200672-7200734

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.1b.1 7200672 7205507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon187023   63   V: 7200672-7200734 Caenorhabditis elegans
Exon187025   159   V: 7200786-7200944 Caenorhabditis elegans
Exon187027   150   V: 7201017-7201166 Caenorhabditis elegans
Exon187030   258   V: 7201453-7201710 Caenorhabditis elegans
Exon187033   376   V: 7202500-7202875 Caenorhabditis elegans
Exon187036   218   V: 7202948-7203165 Caenorhabditis elegans
Exon187039   269   V: 7203213-7203481 Caenorhabditis elegans
Exon187042   376   V: 7203614-7203989 Caenorhabditis elegans
Exon187045   763   V: 7204325-7205087 Caenorhabditis elegans
Exon187047   227   V: 7205281-7205507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09G2.1b.1 7200672 7205507 1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
transcript